Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789586.1_cds_XP_016497180.1_1061
CDS Infomation

[gene=LOC107816023] [db_xref=GeneID:107816023] [protein=DEAD-box ATP-dependent RNA helicase 7-like] [protein_id=XP_016497180.1] [location=join(9535..10038,10961..11095,11197..11337,11416..11527,11723..11793,12035..12189,12283..12394,12659..12760,12842..12902,12993..13161,13233..13329,13407..13501,14083..14216,14386..14576)] [gbkey=CDS]
Sequence

ATGCCTGCACTTGCTGTAACTGAAACAATGGTCTCCGAAGTATCCCAGAAGAAAATGAAG
AAGACCCCCAAATCTCCCGCCGACACCCATGATTTAGAAACTCCTGCTGATAAGAAAAGC
AAAGAAAAAAAGTCGAAAAAGACCAAGATTGATTCTGGGTCTGATTCAGAGGAGCTGAAG
AAGAGCAAAAAGAAAGAGAAAAAGCGAAAAGCTTTGGACTTTGATGATGAGGAAGAGCAG
AAGAGTGAAACGAGCTCCGAGATATGCGAGCCGATAGATGAGAAGAATAGGAAGAAGAAT
AAGAACGCTAAATTGGAGGAGGAAGAAGTGGTTGTTGAGAAGAAAGTGGAGGATCCTAAT
GTGTTGTCTAATTTTAGGATTTCAAAGCCTTTAAGAGAGGCTTTGAATGCTAAAGGAATA
GAAGCACTTTTCCCTATTCAAGCTATGACTTTTGATGATATTCTTGATGGGTCGGATTTG
GTTGGACGAGCTCGTACTGGTCAGGGTAAAACACTGGCATTTGTTTTGCCCATATTAGAG
TCCCTAACAAATGGTCCTACTAAAGCATTGCGAAAAACAGGATATGGGAAGGCTCCAAGT
GTTCTGGTGCTTTTACCTACTAGGGAATTGGCACTTCAGGTGTTTGCGGACTTTGAAGTT
TATGGCCGGGCTATGGGGCTCACTTCATGCTGTTTGTATGGAAATTCTCCCATGGGAGCA
CAACAGGTTCAACTAAAAAGAGGAGTTGATATTGTAGTTGGTACTCCCGGAAGAATTAAG
GACCACATTGAAAGGGGAAATCTTGATTTCAGGTCTTTAAAGTTTCGTGTTCTTGATGAA
GTCGATGAAATGTTAAAAATTGGTTTTGTAGATGATGTCGAACTTATTTTAGGCAAGGTT
GAAGATGCAAGCCAAGTTCAAACAATTCTTTTCAGTGCCACTTTGCCAGACTGGGTGAAG
CATATTGCTTCTAAGTTTCTGAAACCTGATAAGAAAACGGTTGACCTTGTTGGTAATGAG
AAAATGAAGGCCAGTAAAAATGTGAGGCATATTATTATTCCATGCTCTAGTTCTGCAAGA
TCTCAGCTGATTCCTGATATCATTCGGTGCTACAGCAGTGGAGGCCGCACTATAATTTTT
ACTGAGACAAGGGGGTATGCTTCAGAGCTAGCTGGCTTGTTGCCTGGGGCAAGTGCTTTG
CATGGGGAGATACAACAGTCACAGCGTGAGGTTACACTTAAAGGATTCAGATCAGGAAAA
TTCATGACATTAGTGGCCACAAATGTGGCTGCCCGTGGATTGGATATTGACAATGTTCAG
TTAATCATCCAGTGCGAAGCGACTAGTGATGTTGAAGCATATATTCATCGATCTGGGAGG
ACAGGACGGGCAGGAAATACTGGTGTTGCTGTACTTCTGTATGATCCAAGGAAGTCCAAC
ATCTCTAGAATTGAAAGAGAATCTGGTGTGAAGTTTGAGCATTTGTCTGCTCCACAGCCA
GCTGATGTTGCTAAAGCAGCTGGGAAAGAAGCTGCTGATATAATTGCTGAAATCTCCGAT
AGTGTCATACCCGCATTTAAGGCTGCTGCGGAGGAGCTTCTGAATACTTCCGACCTATCA
CCAGCAGAGTTGCTTGCGAAAGCTCTTGCCAAGGCTGCTGGGTATTCTGAGATCAAGACT
CGGTCGCTTCTTACTTCTATGGAGAACTGTGTTACTCTGCTTCTTGAGTGTGGGAGGCCC
ATATTCTCACCTTCCTTTGTCTATAGTGTCTTGAGGAGGTTCCTACCTGGGGAGAAGGTT
GAATCAATCAACGGTCTTACTTTGACGGCCGATGGAAAGGGGGCAGTTTTTGATGTATCT
GCTGAGGACTTGGACCAATTTCTTGCAGGCCAAAAAACTGCACATGGCGTAAATTTAGAG
GTAGTGGAAGCGTTGCCTCAGTTGCAAGAGAGAGAGAAGCCAAGAGGTGGAAGATTTGGA
GGTGGTGGTCGTGGTGGCTTCTCTAACAGAAGAGGCGGAGGTGGCTTTTCTGGAGGAAGA
GGGGGAAGAGGTAATGGTAACTTTGGTCGCAGATGGTAA

Peptide Sequence

PEP ID

XP_016497180.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Nicotiana tabacum]
Sequence

MPALAVTETMVSEVSQKKMKKTPKSPADTHDLETPADKKSKEKKSKKTKIDSGSDSEELK
KSKKKEKKRKALDFDDEEEQKSETSSEICEPIDEKNRKKNKNAKLEEEEVVVEKKVEDPN
VLSNFRISKPLREALNAKGIEALFPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPILE
SLTNGPTKALRKTGYGKAPSVLVLLPTRELALQVFADFEVYGRAMGLTSCCLYGNSPMGA
QQVQLKRGVDIVVGTPGRIKDHIERGNLDFRSLKFRVLDEVDEMLKIGFVDDVELILGKV
EDASQVQTILFSATLPDWVKHIASKFLKPDKKTVDLVGNEKMKASKNVRHIIIPCSSSAR
SQLIPDIIRCYSSGGRTIIFTETRGYASELAGLLPGASALHGEIQQSQREVTLKGFRSGK
FMTLVATNVAARGLDIDNVQLIIQCEATSDVEAYIHRSGRTGRAGNTGVAVLLYDPRKSN
ISRIERESGVKFEHLSAPQPADVAKAAGKEAADIIAEISDSVIPAFKAAAEELLNTSDLS
PAELLAKALAKAAGYSEIKTRSLLTSMENCVTLLLECGRPIFSPSFVYSVLRRFLPGEKV
ESINGLTLTADGKGAVFDVSAEDLDQFLAGQKTAHGVNLEVVEALPQLQEREKPRGGRFG
GGGRGGFSNRRGGGGFSGGRGGRGNGNFGRRW

Transcript Sequence

Gene sequence data has not been registered.